Basic Information
Locus ID:
Sbi_jg23076
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Short Name:
PRK1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000018l | 19609320 | 19613564 | - | Sbi_jg23076 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.42 | 74,200.83 Da | 40.37 | 85.54 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 378 | 635 | 1.4E-30 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 76 | 1.3E-13 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 130 | 188 | 4.8E-8 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 378 | 641 | 1.01E-46 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 32 | 238 | 1.93E-31 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 195 | 242 | 1.2E-6 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 346 | 448 | 1.0E-16 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 450 | 650 | 1.4E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 194 | 9.7E-42 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 374 | 650 | 25.177614 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 247 | 269 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 308 | 322 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 308 | 337 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 252 | 267 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G35390.1 | Leucine-rich repeat protein kinase family protein. Encodes a member of the receptor-like kinase family of genes. In pollen tubes, it accumulates in the plasma membrane of the apical growing tip through the process of exocytosis. | 0 |
| RefSeq | XP_021715870.1 | pollen receptor-like kinase 1 [Chenopodium quinoa] | 0 |
| C0LGU0 | Pollen receptor-like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=PRK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803MET9 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology