Basic Information
Locus ID:
Sbi_jg22864
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000018l | 14490469 | 14494370 | - | Sbi_jg22864 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.42 | 101,607.05 Da | 36.85 | 92.26 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 591 | 865 | 6.37176E-98 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 341 | 377 | 1.2 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 36 | 70 | 1.9E-4 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 380 | 439 | 1.5E-9 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 98 | 156 | 1.8E-6 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 589 | 862 | 1.0E-46 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 59 | 446 | 6.8E-49 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 573 | 882 | 6.79E-79 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 339 | 463 | 6.1E-32 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 544 | 662 | 4.9E-37 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 35 | 337 | 7.2E-77 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 663 | 878 | 4.2E-57 | - |
| SMART | SM00369 | LRR_typ_2 | 143 | 168 | 24.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 402 | 425 | 57.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 585 | 866 | 3.6E-44 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 119 | 142 | 0.037 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 426 | 448 | 25.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 194 | 217 | 110.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 585 | 866 | 40.414066 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 591 | 613 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 710 | 722 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 457 | 476 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 904 | 939 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 0 |
| RefSeq | XP_021847754.1 | receptor protein kinase TMK1-like [Spinacia oleracea] | 0 |
| P43298 | Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9R4J8 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_106740 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology