Basic Information
Locus ID:
Sbi_jg22739
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
BEST Arabidopsis thaliana protein match is
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000018l | 11932658 | 11947192 | + | Sbi_jg22739 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.51 | 101,202.45 Da | 47.14 | 65.81 | -0.92 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04508 | TUDOR | 679 | 719 | 3.94039E-5 | IPR002999 |
| SUPERFAMILY | SSF48371 | ARM repeat | 61 | 259 | 2.44E-10 | IPR016024 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 676 | 717 | 3.91E-8 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 669 | 723 | 1.1E-13 | - |
| SMART | SM00333 | TUDOR_7 | 674 | 733 | 4.8E-4 | IPR002999 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 306 | 674 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 831 | 861 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 789 | 830 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 727 | 937 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 615 | 637 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 332 | 370 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 766 | 787 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 255 | 288 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 868 | 891 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 474 | 607 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 394 | 419 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 922 | 937 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31880.2 | 0 | |
| RefSeq | XP_021769435.1 | ABC transporter F family member 4-like [Chenopodium quinoa] | 0 |
| Q8GUP3 | Sister chromatid cohesion protein PDS5 homolog C OS=Arabidopsis thaliana OX=3702 GN=PDS5C PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9R3I5 | Tudor domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_111020 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology