Basic Information
Locus ID:
Sbi_jg21899
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
F-box domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000020l | 82998541 | 83002760 | - | Sbi_jg21899 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.98 | 64,792.96 Da | 37.77 | 101.96 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 11 | 46 | 4.0E-6 | IPR001810 |
| SUPERFAMILY | SSF52058 | L domain-like | 141 | 486 | 6.46E-10 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 7 | 51 | 8.9E-12 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 3 | 48 | 2.5E-8 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 84 | 362 | 9.1E-12 | IPR032675 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 8 | 60 | 9.762413 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G59000.1 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_010693135.2 | uncharacterized protein LOC104906115 isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q2V3N5 | F-box protein At3g59000 OS=Arabidopsis thaliana OX=3702 GN=At3g59000 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0K9QA55 | F-box domain-containing protein (Fragment) OS=Spinacia oleracea OX=3562 GN=SOVF_207720 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology