Basic Information
Locus ID:
Sbi_jg21823
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Short Name:
EBF2
Description:
EIN3-binding F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000020l | 82054063 | 82056547 | - | Sbi_jg21823 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.27 | 67,830.17 Da | 45.44 | 103.73 | 0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 259 | 282 | 0.73 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 529 | 549 | 0.26 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 233 | 255 | 0.21 | IPR001611 |
| Pfam | PF00646 | F-box domain | 68 | 107 | 5.9E-6 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 331 | 597 | 4.19E-35 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 67 | 105 | 5.49E-8 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 174 | 402 | 1.14E-26 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 438 | 498 | 2.7E-7 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 61 | 110 | 3.8E-6 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 154 | 245 | 2.7E-21 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 499 | 594 | 6.3E-18 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 246 | 435 | 2.7E-36 | IPR032675 |
| SMART | SM00256 | fbox_2 | 71 | 112 | 1.4E-4 | IPR001810 |
| SMART | SM00367 | LRR_CC_2 | 181 | 206 | 0.018 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 233 | 258 | 5.1E-4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 259 | 284 | 1.6E-4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 471 | 496 | 1.3 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 339 | 364 | 0.71 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 445 | 470 | 16.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 553 | 577 | 0.063 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 365 | 390 | 0.22 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 579 | 604 | 140.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 207 | 232 | 1.8E-6 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 391 | 416 | 120.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 500 | 525 | 16.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 527 | 552 | 26.0 | IPR006553 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25490.1 | EIN3-binding F box protein 1. Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. | 0 |
| RefSeq | XP_021769345.1 | EIN3-binding F-box protein 1-like [Chenopodium quinoa] | 0 |
| Q9SKK0 | EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C9ENK7 | F-box domain-containing protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology