Basic Information
Locus ID:
Sbi_jg21821
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Targeting protein for Xklp2 (TPX2)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000020l | 82043221 | 82047669 | + | Sbi_jg21821 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.00 | 49,385.92 Da | 59.62 | 65.49 | -0.96 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF06886 | Targeting protein for Xklp2 (TPX2) domain | 207 | 291 | 2.0E-26 | IPR027329 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 125 | 141 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 55 | 104 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 165 | 181 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 30 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 104 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 322 | 340 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 265 | 369 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 120 | 141 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 295 | 318 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 161 | 201 | - | - |
| Coils | Coil | Coil | 222 | 242 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G32330.1 | TPX2 (targeting protein for Xklp2) protein family. | 0 |
| RefSeq | XP_010696219.1 | protein WVD2-like 6 isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q94C48 | Protein WVD2-like 5 OS=Arabidopsis thaliana OX=3702 GN=WDL5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RF06 | TPX2 domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_074250 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology