Basic Information
Locus ID:
Sbi_jg21563
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Belongs to the peptidase A1 family
Maps and Mapping Data
| Chromosome/Scaffold | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000020l | 78500676 | 78502064 | + | Sbi_jg21563 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.97 | 49,474.20 Da | 48.68 | 82.47 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05476 | pepsin_A_like_plant | 106 | 459 | 1.72317E-65 | IPR034161 |
| Pfam | PF14541 | Xylanase inhibitor C-terminal | 313 | 455 | 1.2E-22 | IPR032799 |
| Pfam | PF14543 | Xylanase inhibitor N-terminal | 107 | 291 | 2.4E-50 | IPR032861 |
| SUPERFAMILY | SSF50630 | Acid proteases | 102 | 459 | 2.38E-85 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 292 | 462 | 1.1E-39 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 90 | 291 | 3.3E-47 | IPR021109 |
| ProSiteProfiles | PS51767 | Peptidase family A1 domain profile. | 107 | 455 | 41.219387 | IPR033121 |
| ProSitePatterns | PS00141 | Eukaryotic and viral aspartyl proteases active site. | 122 | 133 | - | IPR001969 |
| ProSitePatterns | PS00141 | Eukaryotic and viral aspartyl proteases active site. | 341 | 352 | - | IPR001969 |
| PRINTS | PR00792 | Pepsin (A1) aspartic protease family signature | 113 | 133 | 6.9E-6 | IPR001461 |
| PRINTS | PR00792 | Pepsin (A1) aspartic protease family signature | 341 | 352 | 6.9E-6 | IPR001461 |
| PRINTS | PR00792 | Pepsin (A1) aspartic protease family signature | 431 | 446 | 6.9E-6 | IPR001461 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G33340.1 | Eukaryotic aspartyl protease family protein. Encodes a protein with aspartic protease activity (also known as aspartate-type endopeptidase activity). Overexpression of the gene was shown to lead to salicylic acid (SA)-mediated disease resistance upon exposure to the pathogen Pseudomonas syringae. Moreover, overexpression of this gene led to the upregulation of two pathogenesis-related genes PR1 and PR2. This upregulation was no longer observed in transgenic lines expressing the bacterial NahG gene encoding a hydroxylase suppressing SA accumulation. | 0 |
| RefSeq | XP_021726974.1 | aspartic proteinase CDR1-like [Chenopodium quinoa] | 0 |
| Q6XBF8 | Aspartic proteinase CDR1 OS=Arabidopsis thaliana OX=3702 GN=CDR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LJ50 | Peptidase A1 domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology