Basic Information
Locus ID:
Sbi_jg21278
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000020l | 74403334 | 74404929 | - | Sbi_jg21278 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.92 | 57,256.39 Da | 43.26 | 64.36 | -0.94 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 182 | 196 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 408 | 444 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 422 | 444 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 139 | 175 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 117 | 200 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 290 | 347 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 293 | 338 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_048497727.1 | uncharacterized protein LOC125496290 [Beta vulgaris subsp. vulgaris] | 0 |
| TrEMBL | A0A0K9QSW7 | Tudor domain-containing protein (Fragment) OS=Spinacia oleracea OX=3562 GN=SOVF_145200 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 39 | Sbi_jg1104, Sbi_jg17379, Sbi_jg19072, Sbi_jg19374 ... |
| Amaranthaceae | Salicornia europaea | 3 | Seu_jg17676, Seu_jg17679, Seu_jg3882 |