Basic Information
Locus ID:
Sbi_jg21128
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000020l | 71641503 | 71656305 | + | Sbi_jg21128 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.72 | 31,245.88 Da | 33.39 | 71.22 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021769390.1 | uncharacterized protein LOC110733628 [Chenopodium quinoa] | 0 |
| TrEMBL | A0A803KVI1 | BHLH domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg26722 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah034790 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg21128, Sbi_jg22669 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg16552 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00018331 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl62348, Sgl66885 |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.1BG0021640, CQ.Regalona.r1.2AG0023370 |
| Apiaceae | Apium graveolens | 1 | Ag1G00392 |
| Arecaceae | Cocos nucifera | 1 | COCNU_06G014130 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC120107138 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_03.1023.V1.1, AsparagusV1_05.2334.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri12G19881 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT2G31930.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10017383m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp4g14290.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB06g020920.2N |
| Cymodoceaceae | Cymodocea nodosa | 2 | gene.Cymno01g02390, gene.Cymno06g11970 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-638 |
| Plantaginaceae | Plantago ovata | 2 | Pov_00021104, Pov_00031141 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc03g04610 |
| Salicaceae | Populus euphratica | 2 | populus_peu02194, populus_peu35609 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132610255 |
| Solanaceae | Solanum chilense | 1 | SOLCI004604500 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107022977 |
| Tamaricaceae | Tamarix chinensis | 1 | TC01G1463 |