Basic Information
Locus ID:
Sbi_jg2109
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000007l | 68784748 | 68803215 | - | Sbi_jg2109 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.22 | 134,437.97 Da | 39.92 | 92.34 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04301 | NAT_SF | 154 | 214 | 1.47926E-8 | - |
| CDD | cd14066 | STKc_IRAK | 888 | 1153 | 2.23682E-91 | - |
| Pfam | PF00069 | Protein kinase domain | 883 | 1149 | 9.9E-47 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 292 | 330 | 6.9E-9 | IPR013210 |
| Pfam | PF00583 | Acetyltransferase (GNAT) family | 111 | 229 | 9.8E-13 | IPR000182 |
| Pfam | PF13855 | Leucine rich repeat | 413 | 472 | 1.8E-7 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 863 | 1151 | 7.79E-77 | IPR011009 |
| SUPERFAMILY | SSF55729 | Acyl-CoA N-acyltransferases (Nat) | 111 | 235 | 4.01E-19 | IPR016181 |
| SUPERFAMILY | SSF52058 | L domain-like | 303 | 651 | 5.55E-54 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 290 | 553 | 5.2E-64 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 958 | 1179 | 5.5E-58 | - |
| Gene3D | G3DSA:3.40.630.30 | - | 107 | 242 | 5.3E-31 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 853 | 957 | 4.2E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 554 | 675 | 5.3E-10 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 483 | 507 | 57.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 459 | 482 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 387 | 411 | 76.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 435 | 458 | 270.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 882 | 1158 | 1.9E-38 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 578 | 602 | 5.1 | IPR003591 |
| ProSiteProfiles | PS51186 | Gcn5-related N-acetyltransferase (GNAT) domain profile. | 102 | 260 | 15.557985 | IPR000182 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 882 | 1155 | 38.435307 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1002 | 1014 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 888 | 910 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1159 | 1179 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1160 | 1179 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01950.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021767435.1 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X2 [Chenopodium quinoa] | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 0 | |
| TrEMBL | A0A803L3K8 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology