Basic Information
Locus ID:
Sbi_jg21058
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
BEST Arabidopsis thaliana protein match is
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000020l | 70487386 | 70502658 | - | Sbi_jg21058 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.54 | 96,648.29 Da | 47.84 | 65.86 | -0.91 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04508 | TUDOR | 637 | 677 | 3.76273E-5 | IPR002999 |
| SUPERFAMILY | SSF48371 | ARM repeat | 61 | 259 | 1.64E-10 | IPR016024 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 634 | 675 | 4.21E-8 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 627 | 681 | 1.3E-13 | - |
| SMART | SM00333 | TUDOR_7 | 632 | 691 | 0.0011 | IPR002999 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 392 | 417 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 330 | 368 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 724 | 745 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 472 | 565 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 880 | 895 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 826 | 849 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 747 | 788 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 789 | 819 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 685 | 895 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 573 | 595 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 302 | 632 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 255 | 285 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31880.1 | 0 | |
| RefSeq | XP_021769435.1 | ABC transporter F family member 4-like [Chenopodium quinoa] | 0 |
| Q8GUP3 | Sister chromatid cohesion protein PDS5 homolog C OS=Arabidopsis thaliana OX=3702 GN=PDS5C PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9R3I5 | Tudor domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_111020 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology