Basic Information
Locus ID:
Sbi_jg20922
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000020l | 68110664 | 68114590 | + | Sbi_jg20922 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.41 | 94,657.19 Da | 37.63 | 89.33 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 528 | 802 | 6.1378E-99 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 36 | 70 | 1.7E-4 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 315 | 350 | 0.017 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 526 | 799 | 1.0E-46 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 510 | 818 | 6.92E-79 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 42 | 288 | 1.45E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 35 | 310 | 2.1E-63 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 312 | 391 | 8.0E-12 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 481 | 599 | 4.4E-37 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 600 | 815 | 4.5E-57 | - |
| SMART | SM00369 | LRR_typ_2 | 116 | 141 | 24.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 92 | 115 | 0.037 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 167 | 190 | 110.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 522 | 803 | 3.9E-44 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 267 | 290 | 250.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 522 | 803 | 40.329262 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 528 | 550 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 647 | 659 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 843 | 875 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 479 | 498 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 0 |
| RefSeq | XP_021847754.1 | receptor protein kinase TMK1-like [Spinacia oleracea] | 0 |
| P43298 | Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9R4J8 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_106740 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology