Basic Information
Locus ID:
Sbi_jg20913
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000020l | 67965303 | 67969184 | - | Sbi_jg20913 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.67 | 113,184.21 Da | 38.38 | 95.57 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 696 | 975 | 1.65629E-88 | - |
| Pfam | PF00069 | Protein kinase domain | 692 | 973 | 7.1E-47 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 69 | 3.2E-6 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 528 | 550 | 1.2 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 56 | 351 | 1.22E-49 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 293 | 591 | 3.4E-46 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 666 | 975 | 1.62E-73 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 149 | 291 | 4.2E-39 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 673 | 769 | 4.6E-21 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 34 | 148 | 3.6E-30 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 292 | 624 | 4.8E-82 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 770 | 982 | 6.1E-61 | - |
| SMART | SM00369 | LRR_typ_2 | 550 | 574 | 23.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 243 | 267 | 14.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 97 | 121 | 78.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 194 | 218 | 110.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 690 | 975 | 9.4E-30 | IPR000719 |
| SMART | SM00365 | LRR_sd22_2 | 97 | 129 | 58.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 478 | 507 | 330.0 | - |
| SMART | SM00369 | LRR_typ_2 | 314 | 338 | 220.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 267 | 293 | 14.0 | - |
| SMART | SM00369 | LRR_typ_2 | 502 | 526 | 28.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 528 | 551 | 7.665751 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 690 | 980 | 37.686203 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 696 | 720 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 826 | 838 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_021739110.1 | receptor-like protein kinase HSL1 [Chenopodium quinoa] | 0 |
| P47735 | Receptor-like protein kinase 5 OS=Arabidopsis thaliana OX=3702 GN=RLK5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LBI9 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology