Basic Information
Locus ID:
Sbi_jg20800
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Proteinaceous RNase P 1, chloroplastic
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000020l | 66280561 | 66282348 | - | Sbi_jg20800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.86 | 66,225.89 Da | 43.19 | 79.46 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF16953 | Protein-only RNase P | 348 | 574 | 1.5E-70 | IPR031595 |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 95 | 306 | 2.6E-72 | IPR033443 |
| Gene3D | G3DSA:3.40.50.11980 | - | 366 | 540 | 2.5E-229 | - |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 102 | 577 | 2.5E-229 | IPR011990 |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 185 | 219 | 9.20755 | IPR002885 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 66 | 94 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 66 | 87 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32230.1 | proteinaceous RNase P 1. RNase P able to cleave tRNA-like structures involved in the maturation of plant mitochondrial mRNAs. | 0 |
| RefSeq | XP_010669732.2 | proteinaceous RNase P 1, chloroplastic/mitochondrial [Beta vulgaris subsp. vulgaris] | 0 |
| Q66GI4 | Proteinaceous RNase P 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PRORP1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0J8FP36 | ribonuclease P OS=Beta vulgaris subsp. vulgaris OX=3555 GN=BVRB_2g036660 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology