Basic Information
Locus ID:
Sbi_jg2078
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
L-type lectin-domain containing receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000007l | 68413915 | 68416035 | + | Sbi_jg2078 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.87 | 76,254.62 Da | 39.07 | 84.32 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 364 | 637 | 8.09642E-94 | - |
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 21 | 248 | 2.88549E-82 | IPR001220 |
| Pfam | PF00139 | Legume lectin domain | 21 | 255 | 7.3E-57 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 360 | 635 | 6.1E-51 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 340 | 662 | 7.11E-80 | IPR011009 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 20 | 260 | 1.63E-60 | IPR013320 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 436 | 644 | 1.2E-60 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 18 | 258 | 6.5E-65 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 332 | 435 | 1.1E-29 | - |
| SMART | SM00220 | serkin_6 | 358 | 637 | 6.1E-39 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 358 | 646 | 38.887592 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 479 | 491 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 364 | 387 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 253 | 278 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 685 | 706 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53380.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_021845263.1 | L-type lectin-domain containing receptor kinase VIII.1-like [Spinacia oleracea] | 0 |
| Q9LFH9 | L-type lectin-domain containing receptor kinase VIII.1 OS=Arabidopsis thaliana OX=3702 GN=LECRK81 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9RP75 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_050100 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology