Basic Information
Locus ID:
Sbi_jg20680
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000020l | 63756945 | 63765257 | - | Sbi_jg20680 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.28 | 90,844.01 Da | 51.42 | 71.65 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 29 | 182 | 4.04933E-53 | - |
| Pfam | PF00582 | Universal stress protein family | 29 | 159 | 6.3E-9 | IPR006016 |
| Pfam | PF00069 | Protein kinase domain | 483 | 724 | 6.9E-38 | IPR000719 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 29 | 178 | 1.34E-11 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 463 | 743 | 3.28E-65 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 554 | 766 | 1.0E-46 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 28 | 181 | 2.2E-13 | IPR014729 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 437 | 553 | 6.5E-24 | - |
| SMART | SM00220 | serkin_6 | 481 | 750 | 1.2E-23 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 481 | 746 | 33.106789 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 599 | 611 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 789 | 808 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 233 | 249 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 233 | 252 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 291 | 322 | - | - |
| Coils | Coil | Coil | 347 | 374 | - | - |
| Coils | Coil | Coil | 407 | 458 | - | - |
| Coils | Coil | Coil | 382 | 402 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G24370.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_010669606.1 | U-box domain-containing protein 35 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9FKG6 | U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803LZ29 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology