Basic Information
Locus ID:
Sbi_jg20591
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000020l | 61568381 | 61577260 | - | Sbi_jg20591 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.98 | 74,874.44 Da | 38.87 | 89.79 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 348 | 613 | 8.7E-33 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 128 | 187 | 7.9E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 35 | 77 | 1.9E-8 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 36 | 239 | 2.87E-22 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 348 | 622 | 2.67E-50 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 420 | 630 | 2.6E-39 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 36 | 149 | 4.2E-17 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 150 | 241 | 2.4E-17 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 311 | 419 | 3.0E-16 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 344 | 618 | 26.958498 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 296 | 312 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 296 | 319 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 631 | 661 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 629 | 661 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G20190.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021843964.1 | pollen receptor-like kinase 4 [Spinacia oleracea] | 0 |
| Q9LJY0 | Pollen receptor-like kinase 4 OS=Arabidopsis thaliana OX=3702 GN=PRK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803NCK5 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology