Basic Information
Locus ID:
Sbi_jg20185
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000020l | 45631311 | 45687345 | - | Sbi_jg20185 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.34 | 128,747.84 Da | 36.21 | 97.65 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 846 | 1110 | 7.93732E-94 | - |
| Pfam | PF11721 | Malectin domain | 580 | 764 | 2.0E-40 | IPR021720 |
| Pfam | PF13855 | Leucine rich repeat | 445 | 504 | 3.6E-9 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 844 | 1107 | 1.7E-48 | IPR001245 |
| Pfam | PF13516 | Leucine Rich repeat | 513 | 528 | 1.1 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 242 | 559 | 4.08E-51 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 826 | 1133 | 7.15E-81 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 916 | 1116 | 3.4E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 190 | 433 | 1.8E-48 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 434 | 559 | 4.2E-26 | IPR032675 |
| Gene3D | G3DSA:2.60.120.430 | - | 580 | 768 | 2.4E-32 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 803 | 915 | 7.8E-37 | - |
| SMART | SM00220 | serkin_6 | 840 | 1108 | 1.1E-37 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 469 | 491 | 7.76586 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 840 | 1114 | 37.926483 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 846 | 868 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 960 | 972 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56140.1 | Leucine-rich repeat transmembrane protein kinase. | 0 |
| RefSeq | XP_021864482.1 | probable LRR receptor-like serine/threonine-protein kinase At1g56140 isoform X2 [Spinacia oleracea] | 0 |
| C0LGH3 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0K9R015 | Protein kinase domain-containing protein (Fragment) OS=Spinacia oleracea OX=3562 GN=SOVF_122240 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology