Basic Information
Locus ID:
Sbi_jg19818
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Short Name:
CERK1
Description:
chitin elicitor receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000020l | 23593628 | 23611997 | - | Sbi_jg19818 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.73 | 63,294.15 Da | 30.77 | 93.31 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 312 | 578 | 2.0E-45 | IPR001245 |
| Pfam | PF01476 | LysM domain | 40 | 77 | 0.15 | IPR018392 |
| Pfam | PF01476 | LysM domain | 162 | 190 | 0.014 | IPR018392 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 291 | 578 | 3.37E-74 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 382 | 580 | 1.0E-51 | - |
| Gene3D | G3DSA:3.10.350.10 | LysM domain | 29 | 82 | 1.0E-6 | IPR036779 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 296 | 381 | 1.2E-26 | - |
| SMART | SM00257 | LysM_2 | 158 | 200 | 7.1 | IPR018392 |
| SMART | SM00257 | LysM_2 | 32 | 77 | 2.6 | IPR018392 |
| SMART | SM00257 | LysM_2 | 93 | 139 | 1.0 | IPR018392 |
| SMART | SM00220 | serkin_6 | 311 | 580 | 3.9E-34 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 311 | 580 | 38.251564 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 426 | 438 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 317 | 339 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G21630.1 | chitin elicitor receptor kinase 1. LysM receptor-like kinase. Essential in the perception and transduction of the chitin oligosaccharide elicitor. Involved in chitin-mediated plant innate immunity. Located in the plasma membrane. | 0 |
| RefSeq | XP_021763736.1 | chitin elicitor receptor kinase 1-like [Chenopodium quinoa] | 0 |
| Q6UD73 | LysM domain receptor-like kinase 3 OS=Medicago truncatula OX=3880 GN=LYK3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LB77 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology