Basic Information
Locus ID:
Sbi_jg19041
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000025l | 22952816 | 22953590 | - | Sbi_jg19041 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.72 | 26,854.40 Da | 35.34 | 94.53 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 104 | 182 | 9.6E-8 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 17 | 198 | 5.64E-27 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 82 | 3.4E-8 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 95 | 236 | 1.3E-18 | - |
| SMART | SM00220 | serkin_6 | 16 | 229 | 0.0051 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 236 | 11.015347 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G57750.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021835866.1 | non-functional pseudokinase ZED1-like [Spinacia oleracea] | 0 |
| Q8LGB6 | Non-functional pseudokinase ZED1 OS=Arabidopsis thaliana OX=3702 GN=ZED1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9R920 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_097920 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg19041, Sbi_jg37471 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg5313 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00010072 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl22232, Sgl27485 |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG09.1143 |