Basic Information
Locus ID:
Sbi_jg18526
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Lectin-domain containing receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000025l | 13223512 | 13225575 | + | Sbi_jg18526 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.21 | 76,784.87 Da | 41.13 | 92.17 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 358 | 628 | 5.88953E-100 | - |
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 33 | 257 | 6.59846E-83 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 352 | 570 | 9.1E-50 | IPR000719 |
| Pfam | PF00139 | Legume lectin domain | 31 | 260 | 7.4E-59 | IPR001220 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 29 | 259 | 4.66E-61 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 330 | 626 | 8.23E-79 | IPR011009 |
| Gene3D | G3DSA:2.60.120.200 | - | 27 | 270 | 1.7E-65 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 315 | 427 | 4.4E-28 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 428 | 645 | 6.1E-62 | - |
| SMART | SM00220 | serkin_6 | 352 | 614 | 9.9E-36 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 352 | 634 | 38.746254 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 358 | 381 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 475 | 487 | - | IPR008271 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55830.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_010675950.2 | probable L-type lectin-domain containing receptor kinase S.7 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9FHG4 | Probable L-type lectin-domain containing receptor kinase S.7 OS=Arabidopsis thaliana OX=3702 GN=LECRKS7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803MWM2 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology