Basic Information
Locus ID:
Sbi_jg18391
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Sodium hydrogen exchanger
Maps and Mapping Data
| Chromosome/Scaffold | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000025l | 10252326 | 10258263 | - | Sbi_jg18391 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.27 | 43,474.84 Da | 29.01 | 114.49 | 0.70 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00999 | Sodium/hydrogen exchanger family | 6 | 237 | 1.1E-33 | IPR006153 |
| Pfam | PF00999 | Sodium/hydrogen exchanger family | 248 | 383 | 2.3E-10 | IPR006153 |
| Gene3D | G3DSA:6.10.140.1330 | - | 115 | 167 | 8.0E-13 | - |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 83 | 91 | 2.9E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 54 | 65 | 2.9E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 123 | 133 | 2.9E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 68 | 82 | 2.9E-11 | IPR004709 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55470.1 | Na+/H+ (sodium hydrogen) exchanger 3. member of Sodium proton exchanger family | 0 |
| RefSeq | XP_010675850.1 | sodium/hydrogen exchanger 4 isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q8S397 | Sodium/hydrogen exchanger 4 OS=Arabidopsis thaliana OX=3702 GN=NHX4 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5B6VEF3 | Sodium/hydrogen exchanger 4 OS=Gossypium australe OX=47621 GN=EPI10_002436 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology