halophFGD

Basic Information

Locus ID: Sbi_jg17696

Species & Taxonomic ID: Salicornia bigelovii & 46105

Genome Assembly:

Short Name: BGAL10

Description: beta-galactosidase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
ptg000015l	110781221	110804666	-	Sbi_jg17696

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
7.02	230,306.08 Da	39.92	75.48	-0.32

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF17834	Beta-sandwich domain in beta galactosidase	1559	1630	4.9E-29	IPR041392
Pfam	PF17834	Beta-sandwich domain in beta galactosidase	858	929	8.1E-25	IPR041392
Pfam	PF01301	Glycosyl hydrolases family 35	1246	1551	2.1E-110	IPR031330
Pfam	PF02140	Galactose binding lectin domain	1986	2063	3.1E-17	IPR000922
Pfam	PF01301	Glycosyl hydrolases family 35	574	848	4.7E-83	IPR031330
SUPERFAMILY	SSF49785	Galactose-binding domain-like	1089	1215	2.89E-24	IPR008979
SUPERFAMILY	SSF49785	Galactose-binding domain-like	1805	1963	4.25E-21	IPR008979
SUPERFAMILY	SSF51445	(Trans)glycosidases	1237	1556	2.16E-97	IPR017853
SUPERFAMILY	SSF54001	Cysteine proteinases	405	548	1.86E-8	IPR038765
SUPERFAMILY	SSF51445	(Trans)glycosidases	574	854	3.15E-72	IPR017853
SUPERFAMILY	SSF49785	Galactose-binding domain-like	1614	1785	5.31E-14	IPR008979
SUPERFAMILY	SSF49785	Galactose-binding domain-like	913	1066	1.62E-8	IPR008979
Gene3D	G3DSA:3.20.20.80	Glycosidases	1236	1555	7.1E-107	-
Gene3D	G3DSA:3.20.20.80	Glycosidases	560	855	8.1E-75	-
Gene3D	G3DSA:2.60.120.260	-	1819	1954	1.9E-10	-
Gene3D	G3DSA:2.60.120.260	-	1055	1222	4.6E-18	-
Gene3D	G3DSA:2.60.120.740	-	1969	2064	1.4E-12	IPR043159
ProSiteProfiles	PS50228	SUEL-type lectin domain profile.	1978	2064	16.688244	IPR000922
ProSitePatterns	PS01182	Glycosyl hydrolases family 35 putative active site.	1385	1397	-	IPR019801
PRINTS	PR00742	Glycosyl hydrolase family 35 signature	1250	1267	2.8E-65	IPR001944
PRINTS	PR00742	Glycosyl hydrolase family 35 signature	1519	1535	2.8E-65	IPR001944
PRINTS	PR00742	Glycosyl hydrolase family 35 signature	1271	1289	2.8E-65	IPR001944
PRINTS	PR00742	Glycosyl hydrolase family 35 signature	1326	1345	2.8E-65	IPR001944
PRINTS	PR00742	Glycosyl hydrolase family 35 signature	1866	1882	2.8E-65	IPR001944
PRINTS	PR00742	Glycosyl hydrolase family 35 signature	1383	1398	2.8E-65	IPR001944
PRINTS	PR00742	Glycosyl hydrolase family 35 signature	1499	1514	2.8E-65	IPR001944
PRINTS	PR00742	Glycosyl hydrolase family 35 signature	1839	1853	2.8E-65	IPR001944
PRINTS	PR00742	Glycosyl hydrolase family 35 signature	1462	1477	2.8E-65	IPR001944

Gene Ontology

Biological Process:

GO:0005975 (carbohydrate metabolic process)

Molecular Function:

GO:0004553 (hydrolase activity, hydrolyzing O-glycosyl compounds) GO:0030246 (carbohydrate binding)

Best hit

Source	Best Hit ID	Description
TAIR	AT5G63810.1	beta-galactosidase 10. member of Glycoside Hydrolase Family 35
RefSeq	XP_021771726.1	beta-galactosidase 3-like [Chenopodium quinoa]
Swiss-Prot	Q5N8X6	Beta-galactosidase 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0875500 PE=3 SV=1
TrEMBL	A0A803KNC8	Beta-galactosidase OS=Chenopodium quinoa OX=63459 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Salicornia bigelovii	103	Sbi_jg1018, Sbi_jg1323, Sbi_jg14120, Sbi_jg14340, Sbi_jg3658 ... Sbi_jg14358, Sbi_jg14422, Sbi_jg14715, Sbi_jg15292, Sbi_jg15973, Sbi_jg15974, Sbi_jg17125, Sbi_jg17341, Sbi_jg17696, Sbi_jg18172, Sbi_jg18605, Sbi_jg20068, Sbi_jg20069, Sbi_jg20829, Sbi_jg20971, Sbi_jg22016, Sbi_jg23032, Sbi_jg24312, Sbi_jg24876, Sbi_jg25632, Sbi_jg27612, Sbi_jg27649, Sbi_jg27783, Sbi_jg27794, Sbi_jg27883, Sbi_jg28336, Sbi_jg28677, Sbi_jg29003, Sbi_jg29068, Sbi_jg31876, Sbi_jg32627, Sbi_jg32907, Sbi_jg32955, Sbi_jg33022, Sbi_jg33654, Sbi_jg36012, Sbi_jg36358, Sbi_jg36540, Sbi_jg37674, Sbi_jg37820, Sbi_jg39126, Sbi_jg39446, Sbi_jg40047, Sbi_jg40762, Sbi_jg41019, Sbi_jg42089, Sbi_jg42386, Sbi_jg42663, Sbi_jg45013, Sbi_jg45051, Sbi_jg45312, Sbi_jg4601, Sbi_jg46653, Sbi_jg47617, Sbi_jg47924, Sbi_jg48681, Sbi_jg4943, Sbi_jg49763, Sbi_jg50178, Sbi_jg50626, Sbi_jg50907, Sbi_jg51018, Sbi_jg51142, Sbi_jg51229, Sbi_jg51657, Sbi_jg52584, Sbi_jg53113, Sbi_jg54099, Sbi_jg54386, Sbi_jg54653, Sbi_jg54860, Sbi_jg54934, Sbi_jg55487, Sbi_jg56230, Sbi_jg56276, Sbi_jg57499, Sbi_jg57500, Sbi_jg57520, Sbi_jg57835, Sbi_jg59091, Sbi_jg59527, Sbi_jg59534, Sbi_jg59737, Sbi_jg59852, Sbi_jg60221, Sbi_jg60228, Sbi_jg60506, Sbi_jg60691, Sbi_jg60803, Sbi_jg61116, Sbi_jg61247, Sbi_jg61438, Sbi_jg61555, Sbi_jg62837, Sbi_jg63187, Sbi_jg681, Sbi_jg7403, Sbi_jg8948