Basic Information
Locus ID:
Sbi_jg17453
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Short Name:
WRKY25
Description:
WRKY transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000015l | 107057640 | 107059921 | + | Sbi_jg17453 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.11 | 27,157.87 Da | 40.12 | 48.50 | -1.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 147 | 204 | 2.6E-23 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 2 | 58 | 1.1E-19 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 138 | 206 | 1.05E-27 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 1 | 61 | 5.1E-20 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 1 | 62 | 1.9E-21 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 131 | 207 | 1.8E-30 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 146 | 205 | 3.0E-33 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 1 | 60 | 1.2E-24 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 1 | 61 | 21.574131 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 141 | 206 | 32.294022 | IPR003657 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G38470.1 | WRKY DNA-binding protein 33. Member of the plant WRKY transcription factor family. Regulates the antagonistic relationship between defense pathways mediating responses to P. syringae and necrotrophic fungal pathogens. Located in nucleus. Involved in response to various abiotic stresses - especially salt stress. | 0 |
| RefSeq | XP_027329547.1 | WRKY transcription factor WRKY24-like isoform X3 [Abrus precatorius] | 0 |
| Q8S8P5 | Probable WRKY transcription factor 33 OS=Arabidopsis thaliana OX=3702 GN=WRKY33 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8F1T0C6 | WRKY transcription factor protein 23 OS=Zanthoxylum armatum OX=67938 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology