halophFGD

Basic Information

Locus ID: Sbi_jg17352

Species & Taxonomic ID: Salicornia bigelovii & 46105

Genome Assembly:

Description: Belongs to the protein kinase superfamily

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
ptg000015l	105338202	105340084	-	Sbi_jg17352

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.55	19,787.26 Da	33.05	82.08	-0.20

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00069	Protein kinase domain	88	174	7.2E-12	IPR000719
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	82	174	5.27E-21	IPR011009
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	69	179	9.1E-21	-
ProSiteProfiles	PS50011	Protein kinase domain profile.	83	183	12.527684	IPR000719
ProSitePatterns	PS00107	Protein kinases ATP-binding region signature.	89	112	-	IPR017441
MobiDBLite	mobidb-lite	consensus disorder prediction	11	31	-	-

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

KEGG Pathway

KO Term:

K18873 (pathogen-induced protein kinase)

Pathway:

ko04626 (Plant-pathogen interaction) map04626 (Plant-pathogen interaction)

Best hit

Source	Best Hit ID	Description
TAIR	AT5G18610.1	Protein kinase superfamily protein.
RefSeq	XP_024981310.1	probable serine/threonine-protein kinase PBL7 isoform X1 [Cynara cardunculus var. scolymus]
Swiss-Prot	Q1PDV6	Serine/threonine-protein kinase PBL27 OS=Arabidopsis thaliana OX=3702 GN=PBL27 PE=1 SV=1
TrEMBL	A0A2I0HHL9	Protein kinase domain-containing protein OS=Punica granatum OX=22663 GN=CRG98_048435 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Salicornia bigelovii	3	Sbi_jg17351, Sbi_jg17352, Sbi_jg61994
Amaranthaceae	Salicornia europaea	1	Seu_jg615