Basic Information
Locus ID:
Sbi_jg1727
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Ubiquitin fusion degradation protein 1 homolog
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000007l | 62786090 | 62792009 | - | Sbi_jg1727 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.07 | 40,478.46 Da | 48.53 | 70.74 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03152 | Ubiquitin fusion degradation protein UFD1 | 55 | 226 | 3.7E-78 | IPR004854 |
| Gene3D | G3DSA:2.40.40.50 | - | 44 | 150 | 4.5E-43 | IPR042299 |
| Gene3D | G3DSA:3.10.330.10 | - | 151 | 224 | 1.9E-34 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 231 | 256 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 277 | 348 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 231 | 365 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G21270.1 | ubiquitin fusion degradation 1. | 0 |
| RefSeq | XP_010685726.1 | ubiquitin recognition factor in ER-associated degradation protein 1 [Beta vulgaris subsp. vulgaris] | 0 |
| P70362 | Ubiquitin recognition factor in ER-associated degradation protein 1 OS=Mus musculus OX=10090 GN=Ufd1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A803LCF7 | Ubiquitin fusion degradation protein 1 homolog OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology