Basic Information
Locus ID:
Sbi_jg17090
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000015l | 100617365 | 100617826 | - | Sbi_jg17090 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.54 | 17,285.13 Da | 81.19 | 49.61 | -0.77 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF57850 | RING/U-box | 2 | 72 | 1.77E-6 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 2 | 69 | 1.9E-6 | IPR013083 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 14 | 60 | 9.405901 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 120 | 136 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 83 | 153 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg17090 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg23053 |