Basic Information
Locus ID:
Sbi_jg16416
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
receptor-like protein kinase At5g24010
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000015l | 72465229 | 72465558 | + | Sbi_jg16416 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.07 | 12,358.16 Da | 19.64 | 101.93 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 2 | 78 | 1.9E-7 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1 | 109 | 1.88E-16 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 109 | 4.6E-18 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 109 | 12.895168 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G46290.1 | hercules receptor kinase 1. Encodes HERCULES1 (HERK1), a receptor kinase regulated by Brassinosteroids and required for cell elongation during vegetative growth. | 0 |
| RefSeq | XP_052482480.1 | probable receptor-like protein kinase At2g39360 [Gossypium raimondii] | 0 |
| Q9LX66 | Receptor-like protein kinase HERK 1 OS=Arabidopsis thaliana OX=3702 GN=HERK1 PE=1 SV=1 | 0 | |
| TrEMBL | E1AP07 | Pto-like protein kinase (Fragment) OS=Capsicum annuum OX=4072 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah029070 |
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg16416 |