Basic Information
Locus ID:
Sbi_jg15771
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000015l | 24190825 | 24203466 | + | Sbi_jg15771 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.88 | 32,076.99 Da | 52.14 | 75.18 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02674 | Peptidase_C19R | 126 | 270 | 3.71017E-62 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 14 | 270 | 2.5E-38 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 100 | 272 | 2.94E-54 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 6 | 276 | 5.1E-57 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 1 | 273 | 33.022095 | IPR028889 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 216 | 233 | - | IPR018200 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G22030.1 | ubiquitin-specific protease 8. | 0 |
| RefSeq | XP_021860333.1 | ubiquitin carboxyl-terminal hydrolase 8-like isoform X2 [Spinacia oleracea] | 0 |
| Q9C585 | Ubiquitin carboxyl-terminal hydrolase 8 OS=Arabidopsis thaliana OX=3702 GN=UBP8 PE=2 SV=2 | 0 | |
| TrEMBL | A0A803MJX1 | Ubiquitin carboxyl-terminal hydrolase OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology