Basic Information
Locus ID:
Sbi_jg15318
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000015l | 11015708 | 11020094 | - | Sbi_jg15318 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.74 | 108,035.82 Da | 35.63 | 96.99 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 662 | 931 | 1.6E-48 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 287 | 346 | 7.3E-11 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 263 | 285 | 0.1 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 296 | 564 | 6.63E-48 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 662 | 934 | 1.05E-72 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 80 | 396 | 2.55E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 213 | 286 | 4.0E-19 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 353 | 575 | 2.0E-52 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 287 | 352 | 2.7E-17 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 738 | 957 | 1.3E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 40 | 210 | 3.6E-37 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 641 | 737 | 8.2E-20 | - |
| SMART | SM00369 | LRR_typ_2 | 382 | 405 | 170.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 237 | 261 | 250.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 141 | 165 | 20.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 478 | 501 | 280.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 285 | 308 | 31.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 453 | 477 | 140.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 659 | 938 | 7.1E-30 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 309 | 332 | 34.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 357 | 381 | 85.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 659 | 946 | 38.505974 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 785 | 797 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 665 | 688 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 934 | 977 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G61480.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021752360.1 | leucine-rich repeat receptor-like protein kinase TDR [Chenopodium quinoa] | 0 |
| Q9FII5 | Leucine-rich repeat receptor-like protein kinase TDR OS=Arabidopsis thaliana OX=3702 GN=TDR PE=1 SV=1 | 0 | |
| TrEMBL | A0A803KT63 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology