Basic Information
Locus ID:
Sbi_jg15245
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Short Name:
CPK24
Description:
calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000015l | 9527478 | 9531199 | - | Sbi_jg15245 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.83 | 58,289.99 Da | 44.06 | 84.65 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 448 | 500 | 9.74537E-9 | IPR002048 |
| CDD | cd05117 | STKc_CAMK | 68 | 328 | 7.63583E-135 | - |
| Pfam | PF00036 | EF hand | 449 | 471 | 4.6E-7 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 375 | 436 | 1.3E-7 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 69 | 329 | 3.3E-74 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 67 | 347 | 1.48E-83 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 369 | 500 | 4.86E-31 | IPR011992 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 157 | 337 | 6.1E-59 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 338 | 509 | 1.0E-38 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 71 | 156 | 7.9E-27 | - |
| SMART | SM00220 | serkin_6 | 69 | 329 | 7.4E-94 | IPR000719 |
| SMART | SM00054 | efh_1 | 448 | 476 | 1.6E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 376 | 404 | 7.9E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 412 | 440 | 1.7 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 372 | 407 | 14.708673 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 69 | 329 | 47.763744 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 408 | 443 | 8.432208 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 444 | 479 | 13.648647 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 457 | 469 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 385 | 397 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 421 | 433 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 191 | 203 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 48 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G31500.1 | calcium-dependent protein kinase 24. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_010671825.1 | calcium-dependent protein kinase 24 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9SIQ7 | Calcium-dependent protein kinase 24 OS=Arabidopsis thaliana OX=3702 GN=CPK24 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803KTC5 | Calcium-dependent protein kinase 24 OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology