Basic Information
Locus ID:
Sbi_jg15124
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Contains the following InterPro domains Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro IPR015609), Heat shock protein DnaJ, N-terminal (InterPro IPR001623), Heat shock protein DnaJ (InterPro IPR003095)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000015l | 7148912 | 7151257 | + | Sbi_jg15124 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.32 | 86,133.43 Da | 40.28 | 60.22 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06257 | DnaJ | 67 | 120 | 3.60568E-18 | IPR001623 |
| Pfam | PF00226 | DnaJ domain | 67 | 128 | 1.5E-19 | IPR001623 |
| Pfam | PF11926 | Domain of unknown function (DUF3444) | 534 | 741 | 2.1E-73 | IPR024593 |
| SUPERFAMILY | SSF46565 | Chaperone J-domain | 58 | 127 | 4.71E-20 | IPR036869 |
| Gene3D | G3DSA:1.10.287.110 | DnaJ domain | 64 | 168 | 4.3E-21 | IPR036869 |
| SMART | SM00271 | dnaj_3 | 66 | 123 | 6.0E-20 | IPR001623 |
| ProSiteProfiles | PS50076 | dnaJ domain profile. | 67 | 131 | 16.127787 | IPR001623 |
| ProSitePatterns | PS00636 | Nt-dnaJ domain signature. | 108 | 127 | - | IPR018253 |
| PRINTS | PR00625 | DnaJ domain signature | 87 | 102 | 5.7E-10 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 69 | 87 | 5.7E-10 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 103 | 123 | 5.7E-10 | IPR001623 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 305 | 331 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 126 | 249 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 129 | 155 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 202 | 249 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G53150.2 | - | 0 |
| RefSeq | XP_021764482.1 | uncharacterized protein LOC110729087 [Chenopodium quinoa] | 0 |
| Q8TQR1 | Chaperone protein DnaJ OS=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) OX=188937 GN=dnaJ PE=3 SV=1 | 0 | |
| TrEMBL | A0A803L2P9 | J domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology