Basic Information
Locus ID:
Sbi_jg14050
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000022l | 27691554 | 27694247 | - | Sbi_jg14050 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.46 | 98,930.67 Da | 31.55 | 103.00 | 0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 620 | 888 | 1.41686E-83 | - |
| Pfam | PF00069 | Protein kinase domain | 617 | 883 | 1.6E-43 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 313 | 335 | 0.41 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 265 | 287 | 1.1 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 35 | 77 | 3.4E-8 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 185 | 227 | 3.2E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 363 | 444 | 5.65E-12 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 594 | 885 | 7.01E-74 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 34 | 346 | 3.4E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 576 | 689 | 2.5E-27 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 130 | 474 | 3.3E-80 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 690 | 890 | 5.3E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 119 | 6.8E-7 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 190 | 213 | 36.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 166 | 189 | 22.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 214 | 237 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 311 | 335 | 17.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 614 | 888 | 6.0E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 614 | 888 | 38.619049 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 734 | 746 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 620 | 642 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 517 | 536 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02130.2 | - | 0 |
| RefSeq | XP_021756718.1 | LRR receptor-like serine/threonine-protein kinase RPK2 [Chenopodium quinoa] | 0 |
| Q9S7I6 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana OX=3702 GN=RPK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803KVN7 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology