Basic Information
Locus ID:
Sbi_jg13880
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Homocysteine s-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000022l | 22134893 | 22156241 | - | Sbi_jg13880 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.48 | 35,327.22 Da | 43.22 | 88.82 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02574 | Homocysteine S-methyltransferase | 116 | 319 | 1.1E-44 | IPR003726 |
| Pfam | PF02458 | Transferase family | 13 | 81 | 1.6E-7 | IPR003480 |
| SUPERFAMILY | SSF82282 | Homocysteine S-methyltransferase | 111 | 322 | 6.54E-48 | IPR036589 |
| Gene3D | G3DSA:3.20.20.330 | - | 96 | 318 | 7.7E-58 | IPR036589 |
| Gene3D | G3DSA:3.30.559.10 | - | 10 | 93 | 1.5E-13 | IPR023213 |
| ProSiteProfiles | PS50970 | Homocysteine-binding domain profile. | 21 | 319 | 27.341091 | IPR003726 |
Gene Ontology
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25900.1 | Homocysteine S-methyltransferase family protein. | 0 |
| RefSeq | XP_021843483.1 | homocysteine S-methyltransferase 1 [Spinacia oleracea] | 0 |
| A4ZGQ8 | Homocysteine S-methyltransferase 1 OS=Brassica oleracea var. italica OX=36774 GN=HMT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9R4S7 | Hcy-binding domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_113320 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology