Basic Information
Locus ID:
Sbi_jg13313
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Leucine-rich repeat receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000022l | 12207568 | 12213290 | - | Sbi_jg13313 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.31 | 108,861.56 Da | 33.82 | 95.35 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 76 | 2.5E-5 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 696 | 976 | 3.7E-42 | IPR000719 |
| SUPERFAMILY | SSF52047 | RNI-like | 83 | 390 | 2.98E-50 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 685 | 978 | 2.16E-70 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 325 | 601 | 3.14E-48 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 773 | 981 | 1.9E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 248 | 321 | 1.2E-20 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 194 | 247 | 5.0E-9 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 666 | 772 | 3.5E-17 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 322 | 632 | 6.2E-83 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 193 | 5.0E-34 | IPR032675 |
| SMART | SM00220 | serkin_6 | 694 | 978 | 4.8E-29 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 560 | 584 | 36.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 273 | 297 | 40.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 488 | 512 | 42.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 200 | 225 | 17.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 694 | 981 | 36.795761 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 700 | 723 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 818 | 830 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65710.1 | HAESA-like 2. | 0 |
| RefSeq | XP_021855408.1 | LRR receptor-like serine/threonine-protein kinase HSL2 [Spinacia oleracea] | 0 |
| C0LGX3 | LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana OX=3702 GN=HSL2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RTK5 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_031210 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology