Basic Information
Locus ID:
Sbi_jg12980
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
CDPK-related kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000022l | 6538690 | 6544882 | + | Sbi_jg12980 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.12 | 66,826.76 Da | 44.02 | 85.51 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 144 | 406 | 2.19446E-133 | - |
| Pfam | PF00069 | Protein kinase domain | 145 | 407 | 9.0E-72 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 438 | 588 | 7.07E-17 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 142 | 442 | 2.02E-82 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 235 | 416 | 1.9E-62 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 138 | 234 | 2.3E-23 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 425 | 516 | 4.3E-18 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 432 | 586 | 4.3E-18 | - |
| SMART | SM00220 | serkin_6 | 145 | 407 | 4.8E-98 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 145 | 407 | 51.509254 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 269 | 281 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 151 | 177 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 45 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G50530.1 | CDPK-related kinase. CDPK-related kinase | 0 |
| RefSeq | XP_021854678.1 | CDPK-related kinase 5 isoform X2 [Spinacia oleracea] | 0 |
| Q9SCS2 | CDPK-related kinase 5 OS=Arabidopsis thaliana OX=3702 GN=CRK5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9QMB1 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_162870 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology