Basic Information
Locus ID:
Sbi_jg12916
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
1-phosphatidylinositol-3-phosphate 5-kinase FAB1C
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000022l | 5608646 | 5618406 | - | Sbi_jg12916 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.64 | 189,648.42 Da | 50.45 | 75.92 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03334 | Fab1_TCP | 370 | 642 | 3.29207E-126 | - |
| CDD | cd17300 | PIPKc_PIKfyve | 1418 | 1681 | 2.95682E-145 | IPR044769 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 391 | 630 | 8.2E-34 | IPR002423 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1457 | 1623 | 2.4E-34 | IPR002498 |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 436 | 608 | 2.51E-39 | IPR027409 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1412 | 1681 | 5.04E-79 | - |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1376 | 1538 | 3.0E-35 | IPR027484 |
| Gene3D | G3DSA:3.30.810.10 | - | 1539 | 1682 | 3.0E-42 | - |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 435 | 608 | 9.4E-51 | IPR027409 |
| SMART | SM00330 | PIPK_2 | 1395 | 1682 | 2.0E-115 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1361 | 1681 | 59.356506 | IPR002498 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 217 | 254 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 217 | 251 | - | - |
| Coils | Coil | Coil | 472 | 492 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G71010.1 | FORMS APLOID AND BINUCLEATE CELLS 1C. Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the proposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown. | 0 |
| RefSeq | XP_048502539.1 | putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C [Beta vulgaris subsp. vulgaris] | 0 |
| Q9SSJ8 | Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C OS=Arabidopsis thaliana OX=3702 GN=FAB1C PE=2 SV=1 | 0 | |
| TrEMBL | A0A803LJQ8 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology