Basic Information
Locus ID:
Sbi_jg12275
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Hippocampus abundant transcript-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000001l | 121959984 | 121971971 | + | Sbi_jg12275 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.49 | 46,321.83 Da | 36.03 | 109.24 | 0.67 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17330 | MFS_SLC46_TetA_like | 10 | 421 | 2.51728E-46 | - |
| Pfam | PF07690 | Major Facilitator Superfamily | 10 | 381 | 2.0E-21 | IPR011701 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 9 | 426 | 1.31E-35 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 5 | 421 | 6.7E-36 | IPR036259 |
| ProSiteProfiles | PS50850 | Major facilitator superfamily (MFS) profile. | 6 | 427 | 11.037201 | IPR020846 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42210.1 | Major facilitator superfamily protein. | 0 |
| RefSeq | XP_010690317.1 | hippocampus abundant transcript 1 protein [Beta vulgaris subsp. vulgaris] | 0 |
| Q5SR56 | Hippocampus abundant transcript-like protein 1 OS=Homo sapiens OX=9606 GN=MFSD14B PE=1 SV=3 | 0 | |
| TrEMBL | A0A0K9QD99 | MFS domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_192340 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology