Basic Information
Locus ID:
Sbi_jg12114
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000001l | 119336728 | 119352415 | + | Sbi_jg12114 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.21 | 130,762.03 Da | 32.98 | 91.33 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 866 | 1139 | 4.48206E-94 | - |
| CDD | cd02196 | PurM | 3 | 289 | 1.69613E-171 | IPR004733 |
| Pfam | PF13855 | Leucine rich repeat | 378 | 417 | 6.5E-8 | IPR001611 |
| Pfam | PF00586 | AIR synthase related protein, N-terminal domain | 16 | 122 | 2.7E-14 | IPR016188 |
| Pfam | PF02769 | AIR synthase related protein, C-terminal domain | 136 | 295 | 1.9E-31 | IPR010918 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 597 | 634 | 4.0E-4 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 641 | 696 | 1.4E-6 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 861 | 1134 | 4.7E-48 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 297 | 332 | 3.8E-7 | IPR013210 |
| SUPERFAMILY | SSF55326 | PurM N-terminal domain-like | 2 | 128 | 1.5E-39 | IPR036921 |
| SUPERFAMILY | SSF52058 | L domain-like | 310 | 709 | 2.72E-48 | - |
| SUPERFAMILY | SSF56042 | PurM C-terminal domain-like | 130 | 293 | 5.23E-55 | IPR036676 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 835 | 1145 | 5.58E-79 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 299 | 595 | 5.6E-83 | IPR032675 |
| Gene3D | G3DSA:3.30.1330.10 | - | 1 | 129 | 9.9E-55 | IPR036921 |
| Gene3D | G3DSA:3.90.650.10 | - | 130 | 298 | 2.8E-61 | IPR036676 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 597 | 721 | 2.7E-37 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 938 | 1154 | 1.3E-56 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 820 | 937 | 1.1E-36 | - |
| SMART | SM00369 | LRR_typ_2 | 505 | 527 | 210.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 659 | 682 | 170.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 381 | 404 | 0.033 | IPR003591 |
| SMART | SM00220 | serkin_6 | 860 | 1140 | 5.2E-43 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 405 | 430 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 683 | 705 | 46.0 | IPR003591 |
| TIGRFAM | TIGR00878 | purM: phosphoribosylformylglycinamidine cyclo-ligase | 3 | 281 | 3.4E-113 | IPR004733 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 860 | 1140 | 40.993561 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 866 | 888 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 985 | 997 | - | IPR008271 |
| Hamap | MF_00741 | Phosphoribosylformylglycinamidine cyclo-ligase [purM]. | 2 | 306 | 37.65995 | IPR004733 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 734 | 748 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 718 | 748 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 0 |
| RefSeq | XP_010690479.2 | receptor protein kinase TMK1 isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| P43298 | Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RDC0 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_084070 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology