halophFGD

Basic Information

Locus ID: Sbi_jg11890

Species & Taxonomic ID: Salicornia bigelovii & 46105

Genome Assembly:

Description: Brefeldin A-inhibited guanine nucleotide-exchange protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
ptg000001l	115595440	115595922	-	Sbi_jg11890

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
4.36	12,358.14 Da	72.79	76.76	-1.26

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
MobiDBLite	mobidb-lite	consensus disorder prediction	29	60	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	29	77	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	61	77	-	-
Coils	Coil	Coil	7	55	-	-

KEGG Pathway

KO Term:

K18442 (brefeldin A-inhibited guanine nucleotide-exchange protein)

Best hit

Source	Best Hit ID	Description
TAIR	AT4G38200.1	SEC7-like guanine nucleotide exchange family protein.
RefSeq	XP_031128388.1	brefeldin A-inhibited guanine nucleotide-exchange protein 1 [Ipomoea triloba]
TrEMBL	A0A1S4C843	brefeldin A-inhibited guanine nucleotide-exchange protein 1-like OS=Nicotiana tabacum OX=4097 GN=LOC107816133 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Salicornia bigelovii	2	Sbi_jg11890, Sbi_jg46838