Basic Information
Locus ID:
Sbi_jg11690
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
mitotic sister chromatid cohesion
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000001l | 112653952 | 112664893 | + | Sbi_jg11690 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.28 | 58,552.93 Da | 50.51 | 79.60 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF48371 | ARM repeat | 31 | 255 | 8.16E-7 | IPR016024 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 427 | 468 | 1.6E-6 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 421 | 476 | 9.3E-12 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 282 | 422 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 397 | 422 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 380 | 396 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 285 | 317 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 499 | 524 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 362 | 379 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 333 | 355 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G80810.5 | - | 0 |
| RefSeq | XP_021776134.1 | uncharacterized protein LOC110739961 isoform X1 [Chenopodium quinoa] | 0 |
| A8MRD9 | Sister chromatid cohesion protein PDS5 homolog D OS=Arabidopsis thaliana OX=3702 GN=PDS5D PE=2 SV=3 | 0 | |
| TrEMBL | A0A0K9RUR0 | Tudor domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_026500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology