Basic Information
Locus ID:
Sbi_jg11317
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Casein Kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000001l | 107287011 | 107289836 | - | Sbi_jg11317 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.76 | 26,272.68 Da | 56.39 | 58.52 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G03930.1 | protein kinase-related. | 0 |
| RefSeq | XP_022730129.1 | casein kinase 1-like protein HD16 isoform X2 [Durio zibethinus] | 0 |
| Q852L0 | Casein kinase 1-like protein HD16 OS=Oryza sativa subsp. japonica OX=39947 GN=HD16 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2G2W5H8 | Pkinase_fungal domain-containing protein OS=Capsicum baccatum OX=33114 GN=CQW23_19345 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg11317 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg19283 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000050458 |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.7AG0015870 |
| Apiaceae | Apium graveolens | 7 | Ag10G01019, Ag2G01421, Ag3G02853, Ag5G02644, Ag7G00328 ... |
| Brassicaceae | Arabidopsis thaliana | 1 | AT3G03930.1 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00006816 |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_1AG0013370, gene-QOZ80_1AG0035100 ... |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_061267 |
| Poaceae | Thinopyrum elongatum | 2 | Tel5E01G675600, Tel5E01G676300 |
| Poaceae | Zea mays | 3 | Zm00001eb068790_P001, Zm00001eb146020_P001 ... |
| Poaceae | Zoysia japonica | 1 | nbis-gene-31212 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-2944 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-13148, nbisL1-mrna-15291 |
| Solanaceae | Solanum chilense | 1 | SOLCI004132400 |
| Zosteraceae | Zostera marina | 2 | Zosma05g13380.v3.1, Zosma05g13390.v3.1 |