Basic Information
Locus ID:
Sbi_jg11267
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
G-type lectin S-receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000001l | 106352111 | 106373212 | + | Sbi_jg11267 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.80 | 66,382.87 Da | 47.33 | 92.22 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 288 | 547 | 2.88715E-86 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 295 | 543 | 2.9E-42 | IPR001245 |
| Pfam | PF12819 | Malectin-like domain | 8 | 127 | 1.2E-25 | IPR024788 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 288 | 546 | 4.72E-67 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 139 | 220 | 5.4E-6 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 259 | 348 | 1.4E-24 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 349 | 556 | 2.5E-56 | - |
| SMART | SM00220 | serkin_6 | 243 | 552 | 2.2E-13 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 254 | 552 | 32.075005 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 396 | 408 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 555 | 579 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27300.1 | S-locus lectin protein kinase family protein. | 0 |
| RefSeq | XP_021749674.1 | G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 [Chenopodium quinoa] | 0 |
| O81833 | G-type lectin S-receptor-like serine/threonine-protein kinase SD1-1 OS=Arabidopsis thaliana OX=3702 GN=SD11 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C9B3I2 | Protein kinase domain-containing protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg11266, Sbi_jg11267 |