Basic Information
Locus ID:
Sbi_jg1022
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Protein kinase; unclassified specificity.
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000007l | 45792997 | 45795042 | - | Sbi_jg1022 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.64 | 75,502.61 Da | 40.15 | 84.58 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00118 | LysM | 200 | 237 | 6.13477E-5 | IPR018392 |
| Pfam | PF01476 | LysM domain | 201 | 244 | 3.0E-5 | IPR018392 |
| Pfam | PF00069 | Protein kinase domain | 393 | 651 | 1.4E-41 | IPR000719 |
| SUPERFAMILY | SSF54106 | LysM domain | 199 | 244 | 6.67E-5 | IPR036779 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 356 | 651 | 3.69E-65 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 357 | 449 | 8.1E-15 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 451 | 671 | 4.9E-55 | - |
| Gene3D | G3DSA:3.10.350.10 | LysM domain | 199 | 251 | 7.7E-8 | IPR036779 |
| SMART | SM00257 | LysM_2 | 200 | 244 | 8.8E-4 | IPR018392 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 376 | 655 | 33.205727 | IPR000719 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 199 | 243 | 11.283602 | IPR018392 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 256 | 279 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 256 | 273 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G33580.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021856141.1 | protein LYK5 isoform X1 [Spinacia oleracea] | 0 |
| O22808 | Protein LYK5 OS=Arabidopsis thaliana OX=3702 GN=LYK5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9S2X7 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_000660 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology