Basic Information
Locus ID:
Sbi_jg1008
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Wall-associated receptor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000007l | 45263184 | 45264951 | + | Sbi_jg1008 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.01 | 34,936.21 Da | 48.41 | 82.41 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 30 | 54 | 0.00301759 | - |
| Pfam | PF00069 | Protein kinase domain | 104 | 201 | 1.4E-14 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 105 | 289 | 9.17E-34 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 92 | 204 | 2.1E-24 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 205 | 290 | 3.3E-10 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 1 | 64 | 4.6E-7 | - |
| SMART | SM00220 | serkin_6 | 47 | 279 | 7.1E-5 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 279 | 13.333323 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 158 | 170 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G16120.1 | wall associated kinase-like 1. wall-associated kinase like | 0 |
| RefSeq | XP_048499547.1 | wall-associated receptor kinase-like 22 isoform X2 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9S9M5 | Wall-associated receptor kinase-like 1 OS=Arabidopsis thaliana OX=3702 GN=WAKL1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803KMT3 | Wall-associated receptor kinase 2-like OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg1008 |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.4AG0003710, CQ.Regalona.r1.4AG0003740 |