Basic Information
Locus ID:
STRG.956_chr01_-
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Short Name:
EBF2
Description:
EIN3-binding F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 72743660 | 72747419 | - | STRG.956_chr01_- |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.65 | 67,219.04 Da | 40.91 | 105.35 | 0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 256 | 279 | 1.2 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 549 | 570 | 0.12 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 204 | 227 | 0.2 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 337 | 358 | 1.6 | IPR001611 |
| Pfam | PF00646 | F-box domain | 63 | 104 | 2.7E-5 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 165 | 630 | 3.61E-42 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 61 | 100 | 6.15E-7 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 151 | 228 | 1.3E-18 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 436 | 633 | 4.2E-33 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 229 | 433 | 2.9E-38 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 468 | 493 | 0.021 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 522 | 547 | 0.2 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 336 | 361 | 0.52 | IPR006553 |
| SMART | SM00256 | fbox_2 | 66 | 107 | 0.0027 | IPR001810 |
| SMART | SM00367 | LRR_CC_2 | 178 | 203 | 0.0066 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 495 | 520 | 68.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 388 | 413 | 41.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 230 | 255 | 7.3E-4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 256 | 281 | 0.023 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 548 | 572 | 0.04 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 442 | 467 | 210.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 362 | 387 | 0.002 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 575 | 600 | 23.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 204 | 229 | 2.9E-7 | IPR006553 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25490.1 | EIN3-binding F box protein 1. Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. | 0 |
| RefSeq | XP_021605992.1 | EIN3-binding F-box protein 1 [Manihot esculenta] | 0 |
| Q9SKK0 | EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2C9W653 | F-box domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_03G015100 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology