Basic Information
Locus ID:
STRG.740_chr01_-
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 15627587 | 15640472 | - | STRG.740_chr01_- |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.64 | 38,110.04 Da | 31.79 | 76.34 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 90 | 302 | 5.0E-10 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 16 | 305 | 6.59E-30 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 120 | 318 | 1.5E-21 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 9 | 116 | 2.0E-11 | - |
| SMART | SM00220 | serkin_6 | 32 | 311 | 0.0019 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 32 | 308 | 14.011754 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G35600.1 | Protein kinase superfamily protein. plant-type connexin (gap junction-type protein), a component of plasmodesmata | 0 |
| RefSeq | XP_012831712.1 | PREDICTED: protein kinase 2A, chloroplastic-like [Erythranthe guttata] | 0 |
| P27450 | Probable serine/threonine-protein kinase CST OS=Arabidopsis thaliana OX=3702 GN=CST PE=1 SV=2 | 0 | |
| TrEMBL | A0A328DG68 | Protein kinase domain-containing protein OS=Cuscuta australis OX=267555 GN=DM860_009695 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 5 | gene_18400, gene_18664, gene_24620, gene_3959, gene_683 |
| Apiaceae | Apium graveolens | 1 | Ag3G01124 |
| Arecaceae | Cocos nucifera | 7 | COCNU_01G004170, COCNU_01G004180, COCNU_01G004190 ... |
| Plantaginaceae | Plantago ovata | 2 | Pov_00013102, Pov_00020524 |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG05.1782 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.44822.1, evm.TU.45225.1 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-12784, nbisL1-mrna-12785 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-16414, nbisL1-mrna-16417 |
| Solanaceae | Solanum chilense | 1 | SOLCI001117600 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107008469, gene-LOC107014036 |
| Tamaricaceae | Reaumuria soongarica | 2 | STRG.22124_chr09_-, STRG.740_chr01_- |