Basic Information
Locus ID:
STRG.7338_chr04_-
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 15431516 | 15436067 | - | STRG.7338_chr04_- |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.96 | 55,416.29 Da | 38.36 | 91.30 | 0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07983 | X8 domain | 371 | 441 | 1.2E-19 | IPR012946 |
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 34 | 353 | 2.9E-83 | IPR000490 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 34 | 353 | 1.53E-88 | IPR017853 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 33 | 360 | 9.4E-116 | - |
| Gene3D | G3DSA:1.20.58.1040 | - | 364 | 456 | 2.6E-11 | - |
| SMART | SM00768 | X8_cls | 370 | 455 | 4.0E-50 | IPR012946 |
| ProSitePatterns | PS00587 | Glycosyl hydrolases family 17 signature. | 268 | 281 | - | IPR000490 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66250.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_027333098.1 | glucan endo-1,3-beta-glucosidase 2 [Abrus precatorius] | 0 |
| Q9C7U5 | Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis thaliana OX=3702 GN=At1g66250 PE=2 SV=2 | 0 | |
| TrEMBL | A0A061EG89 | glucan endo-1,3-beta-D-glucosidase OS=Theobroma cacao OX=3641 GN=TCM_019120 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology