Basic Information
Locus ID:
STRG.7087_chr04_-
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
F-box Kelch-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 77522955 | 77524653 | - | STRG.7087_chr04_- |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.11 | 40,847.23 Da | 56.32 | 72.81 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 168 | 209 | 4.8E-10 | IPR006652 |
| Pfam | PF13964 | Kelch motif | 120 | 167 | 2.6E-7 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 14 | 56 | 1.7E-6 | IPR036047 |
| SUPERFAMILY | SSF117281 | Kelch motif | 91 | 279 | 3.79E-38 | IPR015915 |
| Gene3D | G3DSA:2.120.10.80 | - | 39 | 321 | 1.5E-36 | IPR015915 |
| SMART | SM00612 | kelc_smart | 130 | 178 | 1.2E-4 | IPR006652 |
| SMART | SM00612 | kelc_smart | 179 | 226 | 0.026 | IPR006652 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G44130.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_002281267.2 | PREDICTED: F-box/kelch-repeat protein At2g44130 [Vitis vinifera] | 0 |
| O80582 | F-box/kelch-repeat protein At2g44130 OS=Arabidopsis thaliana OX=3702 GN=At2g44130 PE=2 SV=2 | 0 | |
| TrEMBL | A0A4D6EWE6 | F-box containing Kelch repeat 2 OS=Persicaria minor OX=488003 GN=FBK2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology