Basic Information
Locus ID:
STRG.4720_chr03_-
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 41738185 | 41741839 | - | STRG.4720_chr03_- |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.26 | 114,185.19 Da | 32.90 | 99.94 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 292 | 314 | 1.5 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 68 | 1.8E-7 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 99 | 159 | 8.1E-8 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 696 | 982 | 4.4E-45 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 55 | 390 | 7.14E-56 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 685 | 984 | 3.91E-74 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 292 | 598 | 6.59E-51 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 291 | 338 | 1.2E-11 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 188 | 290 | 2.4E-28 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 187 | 5.1E-37 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 339 | 626 | 6.8E-70 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 771 | 1002 | 4.6E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 677 | 770 | 5.6E-21 | - |
| SMART | SM00220 | serkin_6 | 694 | 991 | 2.4E-29 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 314 | 338 | 100.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 243 | 267 | 12.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 97 | 121 | 39.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 504 | 528 | 43.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 552 | 576 | 6.3 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 170 | 194 | 54.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 694 | 991 | 37.191513 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 700 | 724 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 836 | 848 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_048495701.1 | receptor-like protein kinase HSL1 [Beta vulgaris subsp. vulgaris] | 0 |
| O49545 | Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 OS=Arabidopsis thaliana OX=3702 GN=BAM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LBI9 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology